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Scalable and Systematic Neurobiology of Psychiatric and Neurodevelopmental Disorder Risk Genes
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Resources

  • Gene selection tool to identify gene attributes and association (Max Haeussler)
  • Association of genes with neurodevelopmental disorders (Bourgeron lab)
  • Process to select priority genes
  • Ten priority genes for capstone project
  • List of selected genes (259) 
  • Control genes (random)Random SSPsyGene control genes
  • Process to select common cell line/s for capstone projects
  • Ngn2 protocols
  • Phenotype Parameters
  • Data Tracking — NIMH Access

DATA ANALYSIS TOOLS

  • SIMS: A deep-learning label transfer tool for single-cell RNA sequencing analysis (Zenodo link)
  • HIPPIE: A Multimodal Deep Learning Model for Electrophysiological Classification of Neurons (Github link)

 

The Collaborative Agreement for Participation in the SSPsyGene Constorium

UC Santa Cruz

UCSC Genomics Institute

Baskin School of Engineering

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